The Japanese art of fishkeeping All Guides
Breeding & Live Foods

How to Culture Green Water: Japan's Fry-Raising Method

By Motoki Totsugi, founder of Tokyo Aqua Garden, keeping aquariums professionally in Tokyo since 2005 · Updated September 2026
A garden pond turned rich green with suspended algae, filter outlet splashing
Working aomizu in a client's garden pond that we maintain. It is the same biology you will culture in a container.

To most aquarium keepers, green water is a problem, a pea-soup tank they want cleared. In Japan it can be a problem too, but it is also a tool. Breeders here grow green water on purpose to raise the fry of medaka (Japanese rice fish) and goldfish, because it surrounds tiny fish with food around the clock. They call it aomizu (, literally "blue water").

If green water appeared in your tank uninvited and you want it gone, that is a different job from the one covered here. This article is for keepers who want to make it on purpose.

Green water is simply tank water dense with phytoplankton, microscopic green algae such as chlorella. For fry, it means food is within reach wherever they swim. Below is how we culture it in Tokyo, and how to keep it from going wrong.

What Green Water Does for Fry

Newly hatched fry are poor hunters. They can only eat food that is tiny, and they starve quickly if it isn't constantly in front of them. Green water solves both problems at once: the phytoplankton is small enough for the smallest mouths, and because it is suspended throughout the water, the fry are never more than a bite away from their next meal. That is why, in Japan, a container of green water is the traditional nursery for medaka and goldfish. It also feeds adult fish as a supplement. And as you will see at the end, it feeds the next step up the live-food ladder.

Days-old medaka fry swimming at the surface of a green-water container
Days-old medaka fry in green water. With phytoplankton suspended throughout, food is never far away.

The Two Ways to Make Green Water

Illustration by Satoko Nakajima
Green water grown in an outdoor container.

Green water is just phytoplankton multiplying in water, so making it means growing that phytoplankton on purpose. There are two routes, and both work. Pick whichever suits your schedule.

Method 1: Add Concentrated Chlorella (the fast route)

Chlorella is a species of green algae, and it is sold as a live liquid concentrate you can buy online. Because it is a living product, use a fresh bottle. The method itself is simple:

Two details decide whether it takes off. First, nutrients: phytoplankton multiplies fastest with a supply of nitrate, so start with water that has already housed fish rather than fresh tap water. Second, light: sunlight drives the photosynthesis that grows the culture. Without a sunny spot, the culture won't grow.

Skip the Substrate and Plants

Grow your green water in a bare container, with no gravel and no live plants. Rooted plants compete directly with phytoplankton for nutrients and light, and the bacteria colonies living in a mature substrate draw down the oxygen your culture needs. Strip those competitors out and the algae gets the full share, which means a faster, denser culture.

Managing Summer Heat

Chlorella itself is tough; it survives even at 99–104°F (37–40°C). The trouble is what heat does to the water: high temperatures drive oxygen out and can trigger unwanted algae. As a safe ceiling, keep the culture below about 86°F (30°C). In hot weather, that usually means a bit of shade and topping up the water level as it evaporates. A reed screen or shade cloth over the container and a simple auto top-off both help hold the temperature down.

Caution: green water vs. cyanobacteria. Not every green, murky container is good green water. If the water turns slimy or thick and gives off an unpleasant, musty smell, that is cyanobacteria (blue-green algae), not phytoplankton. It can be toxic and it drives oxygen down, so do not feed fish from it. Healthy green water stays evenly tinted and does not stink; the slimy, smelly version should be discarded, not fixed.

Naturally grown green water beneath floating plants
A naturally grown culture under floating plants. This route takes two to three months.

Method 2: Let It Grow Naturally (the slow route)

You don't strictly need a chlorella bottle. Given the right conditions, phytoplankton appears on its own, and if you grow it out, the water turns green by itself. The catch is time: this route can take 2–3 months, so save it for when you're not in a hurry.

All you do is aerate the water and leave it in the sun. Used tank water with a bit of nitrate in it is ideal fuel. If you're starting from cleaner water, you can add nutrients by dropping in some bruised or damaged plant matter, or a little liquid plant fertilizer.

The payoff for the wait is self-sufficiency: once you have a healthy natural culture going, you can use it as a starter to seed the next batch, over and over. The downside is that it is harder to control (the water can foul partway through), so if reliability matters, the chlorella concentrate is the safer bet.

Keep It at the Right Concentration

Dense yellow-green water surface with medaka barely visible
Too dense: the bottom of this container has disappeared entirely. Time to thin the culture with a water change.

A finished culture doesn't sit still. Left alone, the phytoplankton keeps multiplying until the water goes dark and over-dense, and thick green water brings real risks:

Japanese breeders judge the right density by one rule: you should be able to just faintly make out the bottom of the container. To hold it there, do regular partial water changes to thin it, and run gentle aeration to keep oxygen up.

In a client's large freshwater tank, we once found the water so green that we could not see through to the far side, although all the fish were healthy. We changed twice our usual volume, 160 liters (about 42 gallons), cut the lighting from 12 hours to 8 and from six lights to four, and added an algae inhibitor. By our next visit, the green tint was almost gone.

For Fry, Thinner Is Safer

Fry have immature immune systems, so keep the culture even thinner for them. Thin water does mean less food, but avoiding the risks of thick water matters more, and you can make up the difference with other foods: powdered fry food, or live foods like daphnia and paramecium. Fry raised on green water plus these foods tend to grow up hardier than those on green water alone. For serious rearing and breeding, that is the standard approach: keep the green water thin and feed live or prepared food alongside it.

The Next Step: From Green Water to Daphnia

There is one more use for it. The phytoplankton that makes green water is also excellent food for daphnia (mijinko), the small crustaceans that, in turn, feed larger fry and adult fish. So once your fry have grown a little, you can put your green water to work as a daphnia culture.

Daphnia multiply fast on nutrient-rich green water, but there is a catch: they graze the phytoplankton down almost as quickly, and once the food runs out their numbers collapse. The fix is to keep a separate green-water-only container running on the side. Whenever the daphnia tank starts to clear, top it back up with green water from your reserve, and the culture stays stable.

The most useful habit is keeping a spare. Our standard approach is a bare container of green water in a sunny spot, fed with used tank water, so there is always a base to seed the next batch or refill a daphnia culture. For fry we run it deliberately thin and let powdered and live food do the rest. Food is always there, without the overnight oxygen risk of a dark, over-dense tank.

About Tokyo Aqua Garden
We are a professional aquarium design & maintenance company based in Tokyo, Japan. Our aquarists install and maintain aquariums for offices, clinics and homes across Tokyo, and we have published more than 3,600 aquarium care articles in Japanese. In Japan we spend years learning to make green water on purpose and then to clear it on cue; this guide hands you both halves of that craft. Tokyo Aqua Garden is not affiliated with Tropica Aquarium Plants of Denmark.
Originally published in Japanese on t-aquagarden.com. This English version has been adapted for international readers. Units, water sources and products have been localized for the US.